BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B04SP1|AL425474
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1632 1633 0.0
>3x_Contig1632
Length = 13927
Score = 1633 bits (812), Expect = 0.0
Identities = 863/892 (96%), Gaps = 1/892 (0%)
Strand = Plus / Plus
Query: 1 ttgttcctwcctgcacttcgcagggtttctgggatgattttttctttgatgtaggtcgaa 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgttccaacctgcacttcgcagggtttctgggatgattttttctttgatgtaggtcgaa 310
Query: 61 cattctacgtaggtggaaggdtctatgccttctacttcwatttcgttatattttwgtttg 120
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 311 cattctacgtaggtggaaggatctatgccttctacttcaatttcgttatattttagtttg 370
Query: 121 gdagadgccatcgttgttgctttgtwgctaattactcawctaaggcgagtttctcatcga 180
| ||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 371 gaagaagccatcgttgttgctttgtagctaattactcaactaaggcgagtttctcatcga 430
Query: 181 ttganttatcaatactcaatgctacgataacttgggaagttattgtagatttcttttcga 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgaattatcaatactcaatgctacgataacttgggaagttattgtagatttcttttcga 490
Query: 241 cgagatgggatgagcwttgatacgatgadagctattctgcggactgtttacacccttaca 300
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 491 cgagatgggatgagcattgatacgatgaaagctattctgcggactgtttacacccttaca 550
Query: 301 tatgttatabatgtcaacacaacacccatgcaccttgataawdctccaaaggaattawtt 360
||||| | | ||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 551 tatgtaaaaaatgtcaacacaacacccatgcaccttgataaaactccaaaggaattaatt 610
Query: 361 tcctctttgactagtggtcacgtgcattttadcwatgcaaacccgttgtattaagcaata 420
||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 611 tcctctttgactagtggtcacgtgcatttaaacaatgcaaacccgttgtattaagcaata 670
Query: 421 caacgttaaagtattaacaagtccggcatatggwttgantcctcagcaccagatggtttt 480
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 671 caacgttaaagtattaacaagtccggcatatggattgaatcctcagcaccagatggtttt 730
Query: 481 caagcgtagagggtacatcctgataccattcactcaagctccttcttttttatwatttdc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 731 caagcgtagagggtacatcctgataccattcactcaagctccttcttttttataatatac 790
Query: 541 catatgagttacacctatttctgtttgattaacggatgcttgtttgtttttcatgtgggc 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 791 catatgagttacacctatttctgtatgattaacggatgcttgtttgtttttcatgtgggc 850
Query: 601 cttaatttggaaattggaaaatctcaaatttttcatcgctgagggaaaccaaacttgaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 cttaatttggaaattggaaaatctcaaatttttcatcgctgagggaaaccaaacttgaaa 910
Query: 661 aatattgaattttatgataaaacgtcctttacatatgaatatacataattggatgttaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 aatattgaattttatgataaaacgtcctttacatatgaatatacataattggatgttaag 970
Query: 721 tacttgattagatttgtagtttgtatatagtttacaagaaccacaggtactaccttaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 tacttgattagatttgtagtttgtatatagtttacaagaaccacaggtactaccttaaac 1030
Query: 781 atcctatcactaaaaaagtcgaaatggggggcgtccgtgaaaagaaagctgaatactttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 atcctatcactaaaaaagtcgaaatggggggcgtccgtgaaaagaaagctgaatactttg 1090
Query: 841 ccaagctaagag-atacttggaagaatacaagtctgtcttcgttgttggwgt 891
|||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1091 ccaagctaagagaatacttggaagaatacaagtctgtcttcgttgttggtgt 1142
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5851
Number of Sequences: 1807
Number of extensions: 5851
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)